Bivariate Pair Correlation Function

bi_pair_correlation(
  mif,
  mnames,
  r_range = NULL,
  num_permutations = 100,
  edge_correction = "translation",
  keep_permutation_distribution = FALSE,
  workers = 1,
  overwrite = FALSE,
  xloc = NULL,
  yloc = NULL
)

Arguments

mif: object of class `mif`
mnames: character vector or dataframe with 2 columns containing markers/marker combinations to run
r_range: numeric vector radii to measure
num_permutations: integer for the number of permutations to run
edge_correction: character string for which edge correction to implement for Ripley's K
keep_permutation_distribution: boolean whether to summarise the permutations or keep all
workers: integer for number of cores to use when calculating
overwrite: boolean for whether to overwrite existing bivariate pair correlation results
xloc: x location column in spatial files
yloc: y location column in spatial files

Value

`mif` object with the bivariate_pair_correlation slot filled